PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_Sca107594G01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 68aa    MW: 8033.93 Da    PI: 8.9472
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_Sca107594G01genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.39.5e-25264163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L +eN +L+ el++l++e++kl se+
  Gh_Sca107594G01  2 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVENLANENCTLRGELQKLSDECEKLSSEN 64
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.7E-19161No hitNo description
SMARTSM003385.1E-19266IPR004827Basic-leucine zipper domain
PfamPF001701.8E-22264IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.036467IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.31E-13561No hitNo description
CDDcd147021.72E-10757No hitNo description
PROSITE patternPS000360924IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
DERELKRQKR KQSNRESARR SRLRKQAECE ELQARVENLA NENCTLRGEL QKLSDECEKL  60
SSENSSIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824RRSRLRK
21825RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.22714e-33ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012436919.14e-34PREDICTED: G-box-binding factor 1-like isoform X1
RefseqXP_012491689.14e-34PREDICTED: G-box-binding factor 1-like
SwissprotP427741e-26GBF1_ARATH; G-box-binding factor 1
TrEMBLA0A0D2SNM35e-40A0A0D2SNM3_G
STRINGGLYMA02G06550.21e-29(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2683933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.23e-28G-box binding factor 1